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Gallery|Climate Crisis

Africa’s cholera crisis worsens amid extreme weather events

In southern and East Africa, more than 6,000 people have died since a series of cholera outbreaks began in late 2021.

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A family uses a boat after fleeing floodwaters that wreaked havoc in the Githurai area of Nairobi, Kenya, April 24, 2024.
A family uses a boat after fleeing floodwaters that wrought havoc in the Githurai area of Nairobi, Kenya, in April. [Patrick Ngugi/AP Photo]
By AP
Published On 24 May 202424 May 2024

Extreme weather events that have relentlessly hit parts of Africa in the last three years have caused crises of hunger and displacement. The storms, floods and drought also leave another deadly threat behind: some of the continent’s worst outbreaks of cholera.

In Southern and East Africa, more than 6,000 people have died and nearly 350,000 cases have been reported since a series of cholera outbreaks began in late 2021.

Malawi and Zambia have had their worst outbreaks on record. Zimbabwe has had multiple waves. Mozambique, Kenya, Ethiopia and Somalia also have been badly affected. All have experienced floods or drought – or both.

Health authorities, scientists and aid agencies say the unprecedented surge of the water-borne bacterial infection in Africa is the newest example of how extreme weather is playing a role in driving disease outbreaks.

“The outbreaks are getting much larger because the extreme climate events are getting much more common,” said Tulio de Oliveira, a South Africa-based scientist who studies diseases in the developing world.

De Oliveira, who led a team that identified new coronavirus variants during the COVID-19 pandemic, said Southern Africa’s latest outbreaks can be traced to the cyclones and floods that hit Malawi in late 2021 and early 2022, carrying the cholera bacteria to areas it does not normally reach.

Africa Climate Cholera
A young girl fetches water from a well in Lilanda township in Lusaka, Zambia [Tsvangirayi Mukwazhi/AP Photo]

Zimbabwe and Zambia have seen cases rise as they wrestle with severe drought and desperate people rely on less safe sources of water like boreholes, shallow wells and rivers, which can all be contaminated. Days after the deadly flooding in Kenya and other parts of East Africa this month, cholera cases also appeared.

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Historically vulnerable, Africa is even more at risk as it faces the worst effects of climate change as well as the El Nino weather phenomenon, health experts say.

The World Health Organization (WHO) calls cholera a disease of poverty, as it thrives where there is poor sanitation and a lack of clean water. Africa has had eight times as many deaths this year as the Middle East, the second-most affected region.

“It doesn’t affect countries with resources,” said Dr Daniela Garone, the international medical coordinator for Doctors Without Borders, known by its French initials MSF. “So, it doesn’t bring the resources.”

Billions of dollars have been invested into other diseases that predominantly affect the world’s most vulnerable, like polio and tuberculosis, largely because those diseases are highly contagious and could cause outbreaks even in rich countries. But that is not the case with cholera, where epidemics remain contained.

Street vendors sell phone cards under a billboard urging people to protect themselves from Cholera in Lusaka, Zambia,
Street vendors sell phone cards under a billboard urging people to protect themselves from cholera in Lusaka, Zambia [Tsvangirayi Mukwazhi/AP Photo]

In what has become a perfect storm, the WHO also said this month that there is a “critical shortage” of oral cholera vaccines in the global stockpile.

Since the start of 2023, 15 countries – the desperate few – have requested 82 million doses to deal with deadly outbreaks while only 46 million doses were available.

There are just 3.2 million doses left, below the target of having at least 5 million in reserve.

Vaccines alliance GAVI and the UN children’s fund UNICEF said last month that the approval of a new cholera vaccine would boost stocks. But the result of the shortage has already been measured in deaths.

While there are currently cholera epidemics in the Middle East, the Americas and Southeast Asia, Africa is by far the worst-affected region.

People gather on a bridge after floodwater washed away houses near Nakuru, Kenya,
People gather on a bridge after floodwaters washed away houses near Nakuru, Kenya, last month. [Brian Inganga/AP Photo]
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Children fetch water using a wheelbarrow in Lilanda township in Lusaka, Zambia
Children fetch water using a wheelbarrow in Lilanda township in Lusaka, Zambia, an impoverished area that is a typical cholera hotspot. [Tsvangirayi Mukwazhi/AP Photo]
Mildred Banda holds a phone showing a picture of her one-year-old son who died of Cholera in Lilanda township in Lusaka, Zambia,
Mildred Banda holds a phone showing a picture of her one-year-old son who died of cholera in Lilanda in Lusaka. [Tsvangirayi Mukwazhi/AP Photo]
A nurse exits from a cholera treatment centre in Lusaka, Zambia,
A nurse exits from a cholera treatment centre in Lusaka. [Tsvangirayi Mukwazhi/AP Photo]
Children play near stagnant pools of water in Lilanda township in Lusaka, Zambia,
Children play near stagnant pools of water in Lilanda. [Tsvangirayi Mukwazhi/AP Photo]
Hospital beds stand empty in a ward dedicated to Cholera patients at a government hospital in Lusaka,
Hospital beds in a ward dedicated to cholera patients at a government hospital in Lusaka. [Tsvangirayi Mukwazhi/AP Photo]
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Floodwaters are visible in Ombaka Village, Kisumu, Kenya
Floodwaters in Ombaka Village, Kisumu, Kenya, last month. Extreme weather events have hit parts of Africa relentlessly in the last three years. [Brian Ongoro/AP Photo]

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